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fix load errors from load-all

db4
Joe Groff 2009-10-28 13:56:15 -05:00
parent 2ecf3fb568
commit ef25935366
4 changed files with 44 additions and 37 deletions
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1
basis/persistent/hashtables/nodes/bitmap/bitmap.factor
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@ -46,7 +46,6 @@ M:: bitmap-node (new-at) ( shift value key hashcode bitmap-node -- node' added-l
<bitmap-node> <bitmap-node>
] if ] if
new-leaf new-leaf
]
] if ; ] if ;
M:: bitmap-node (pluck-at) ( key hashcode bitmap-node -- node' ) M:: bitmap-node (pluck-at) ( key hashcode bitmap-node -- node' )

14
extra/benchmark/fasta/fasta.factor
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@ -77,12 +77,15 @@ CONSTANT: homo-sapiens
: write-repeat-fasta ( n alu desc id -- ) : write-repeat-fasta ( n alu desc id -- )
write-description write-description
[let
0 :> k! :> alu 0 :> k! :> alu
[| len | k len alu make-repeat-fasta k! ] split-lines ; inline [| len | k len alu make-repeat-fasta k! ] split-lines
] ; inline
: fasta ( n out -- ) : fasta ( n out -- )
homo-sapiens make-cumulative homo-sapiens make-cumulative
IUB make-cumulative IUB make-cumulative
[let
:> homo-sapiens-floats :> homo-sapiens-floats
:> homo-sapiens-chars :> homo-sapiens-chars
:> IUB-floats :> IUB-floats
@ -95,10 +98,13 @@ CONSTANT: homo-sapiens
n 2 * ALU "Homo sapiens alu" "ONE" write-repeat-fasta n 2 * ALU "Homo sapiens alu" "ONE" write-repeat-fasta
initial-seed initial-seed
n 3 * homo-sapiens-chars homo-sapiens-floats "IUB ambiguity codes" "TWO" write-random-fasta n 3 * homo-sapiens-chars homo-sapiens-floats
n 5 * IUB-chars IUB-floats "Homo sapiens frequency" "THREE" write-random-fasta "IUB ambiguity codes" "TWO" write-random-fasta
n 5 * IUB-chars IUB-floats
"Homo sapiens frequency" "THREE" write-random-fasta
drop drop
] with-file-writer ; ] with-file-writer
] ;
: run-fasta ( -- ) 2500000 reverse-complement-in fasta ; : run-fasta ( -- ) 2500000 reverse-complement-in fasta ;

4
extra/mongodb/driver/driver.factor
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@ -151,6 +151,7 @@ M: mdb-collection create-collection
[ "$cmd" = ] [ "system" head? ] bi or ; [ "$cmd" = ] [ "system" head? ] bi or ;
: check-collection ( collection -- fq-collection ) : check-collection ( collection -- fq-collection )
[let
mdb-instance :> instance mdb-instance :> instance
instance name>> :> instance-name instance name>> :> instance-name
dup mdb-collection? [ name>> ] when dup mdb-collection? [ name>> ] when
@ -158,7 +159,8 @@ M: mdb-collection create-collection
[ nip ] [ drop ] if [ nip ] [ drop ] if
[ ] [ reserved-namespace? ] bi [ ] [ reserved-namespace? ] bi
[ instance (ensure-collection) ] unless [ instance (ensure-collection) ] unless
[ instance-name ] dip "." glue ; [ instance-name ] dip "." glue
] ;
: fix-query-collection ( mdb-query -- mdb-query ) : fix-query-collection ( mdb-query -- mdb-query )
[ check-collection ] change-collection ; inline [ check-collection ] change-collection ; inline

4
extra/mongodb/operations/operations.factor
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@ -105,9 +105,9 @@ USE: tools.walker
! [ dump-to-file ] keep ! [ dump-to-file ] keep
write flush ; inline write flush ; inline
: build-query-object ( query -- selector ) :: build-query-object ( query -- selector )
H{ } clone :> selector H{ } clone :> selector
{ [ orderby>> [ "orderby" selector set-at ] when* ] query { [ orderby>> [ "orderby" selector set-at ] when* ]
[ explain>> [ "$explain" selector set-at ] when* ] [ explain>> [ "$explain" selector set-at ] when* ]
[ hint>> [ "$hint" selector set-at ] when* ] [ hint>> [ "$hint" selector set-at ] when* ]
[ query>> "query" selector set-at ] [ query>> "query" selector set-at ]