factor/basis/math/statistics/statistics.factor

64 lines
1.5 KiB
Factor

! Copyright (C) 2008 Doug Coleman, Michael Judge.
! See http://factorcode.org/license.txt for BSD license.
USING: arrays combinators kernel math math.analysis math.functions sequences
sequences.lib sorting ;
IN: math.statistics
: mean ( seq -- n )
[ sum ] [ length ] bi / ;
: geometric-mean ( seq -- n )
[ length ] [ product ] bi nth-root ;
: harmonic-mean ( seq -- n )
[ recip ] sigma recip ;
: median ( seq -- n )
natural-sort dup length even? [
[ midpoint@ dup 1- 2array ] keep nths mean
] [
[ midpoint@ ] keep nth
] if ;
: range ( seq -- n )
minmax swap - ;
: var ( seq -- x )
#! normalize by N-1
dup length 1 <= [
drop 0
] [
[ [ mean ] keep [ - sq ] with sigma ] keep
length 1- /
] if ;
: std ( seq -- x )
var sqrt ;
: ste ( seq -- x )
[ std ] [ length ] bi sqrt / ;
: ((r)) ( mean(x) mean(y) {x} {y} -- (r) )
! finds sigma((xi-mean(x))(yi-mean(y))
0 [ [ [ pick ] dip swap - ] bi@ * + ] 2reduce 2nip ;
: (r) ( mean(x) mean(y) {x} {y} sx sy -- r )
* recip [ [ ((r)) ] keep length 1- / ] dip * ;
: [r] ( {{x,y}...} -- mean(x) mean(y) {x} {y} sx sy )
first2 [ [ [ mean ] bi@ ] 2keep ] 2keep [ std ] bi@ ;
: r ( {{x,y}...} -- r )
[r] (r) ;
: r^2 ( {{x,y}...} -- r )
r sq ;
: least-squares ( {{x,y}...} -- alpha beta )
[r] { [ 2dup ] [ ] [ ] [ ] [ ] } spread
! stack is mean(x) mean(y) mean(x) mean(y) {x} {y} sx sy
[ (r) ] 2keep ! stack is mean(x) mean(y) r sx sy
swap / * ! stack is mean(x) mean(y) beta
[ swapd * - ] keep ;